Horst Ibelgaufts' COPE:
Cytokines & Cells Online Pathfinder Encyclopaedia

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COPE

The acronym COPE stands for "Cytokines & Cells Online Pathfinder Encyclopaedia. The version number (times 1,000) reflects the number of entries.
COPE needs your support to keep this academic encyclopedia a free bioinformatics service to the scientific community. Please be so kind and visit the HELP REQUEST page. A 1-page pdf media information file can be downloaded by clicking on the COPE ADVERTISING OPTIONS logo at the top of all entry pages.

Organisation of COPE entries
» upper part of the table below
describes COPE's organization of the alphabetical order of entries, spelling conventions, navigational features, etc.

» lower part of the table below introduces major COPE pages that can be used as entry points to explore COPE contents. It also contains a list of the subdictionaries integrated into the main body ofthis dictionary.

PagesDescription
27 ALPHABET PAGES
are accessible from the alphabet bar and list all COPE entry terms. The # sign is for entry names with number prefixes. You can use the freetext search option of COPE to search for text occurrences of terms that do not appear as entry terms.
24,700+ ENTRY PAGES
each COPE entry has its own page. Access to individual pages of COPE is possible only from within this encyclopedia. Links from outside have been disabled
  ORGANISATION
Order of entries should be strictly numerical/ alphabetical, ignoring all plus signs, hyphens, brackets, slashes, commas, decimal points, etc. within an entry term. Numbers come before letters. Thus the order is: 5q minus syndrome ... 4-1BB ... 520 ... 6-26 ... 14-3-3 ... 4-1.10 ... 5637 ... 744.1 ... Alpha-2-Macroglobulin ... alpha-1,4-galactosylstransferase ... ANP[4-28] ... ANP[5-28] ... ANP[95-126] ... ANP[103-125] ... CD47R ... CD48 ... ... CD150 ... CD339 ... CDT6 ... CDw149 ... CCR2 ... CCR11 ... CCR5-2 ... FGF-23 ... FGF-14-1a ... FGF-14-1b ... HtrA2 ... H(+) transporting lysosomal ATPase V0 subunit A2 ... HTRA serine peptidase 1 ... LGR7 ... LGR7-Truncate ... LGR8 ... LGR7.1 ... LGR7.2 ... LGR8.1 ... LGR7.10 ...
#-sign in alphabet bar is for entries beginning with numbers
Roman numerals are usually converted into Arabic numerals. If not (as in some abbreviations), they are treated as letters
German Umlauts are ä, ö, ü. Entry terms containing such umlauts are treated with respect to their positions in an alphabetical order as if spelled with ae, oe, ue, respectively
Greek letters are spelled out as latinized word components (for example, Omega-Interferon is under letter 'O' and not 'I')
Acronyms, rather than the long form, usually serve as main entries
Spelling may differ from (variable) spellings in the cited references or databanks such as MedLine/PubMed. Although the CataCopia programme generating hypertexted COPE pages can accomodate for variable spellings of a headword, I prefer consistent spelling.
  NAVIGATION
Navigation buttons labelled PREVIOUS and NEXT allow leafing through consecutive entries independent of the browser's own page history function. One navigation button accesses a random entry
  HYPERLINKS
Hypertexted COPE pages are generated automatically by COPE's proprietary CataCopia programme, which recognizes exact occurrences and derivatives of a headword and creates links to the appropriate entry page. Word derivatives are 'hidden' and do not appear in the alphabet lists. (Note: on rare occasions, a link may bring you to an unexpected place. This is by intention, but that you can find out yourself). Word derivatives of a headword comprise:
(1) simple singular/plural forms: Cytokine (linking to Cytokines)
(2) affixed forms: CD23(+) (linking to CD23), CD34(high) and CD34(low) (linking to CD34), c-kit and v-kit (linking to kit)
(3) adjectival forms: chemotactic (linking to chemotaxis), apoptotic (linking to apoptosis)
(4) conceptual cross-referencing words: blood vessels (linking to angiogenesis), tissue repair (linking to wound healing), cloned (linking to Gene library), cells (linking to Cell types)
(5) synonymous terms: glia (linking to glial cells), culture supernatant (linking to conditioned medium)
(6) Terms such as avian, bovine, canine, caprine, chicken, dog, equine, feline, goat, guinea pig, horse, human, lapine, mouse, murine, ovine, pig, porcine, rabbit, rat, trout, and some others all lead to Cytokine Inter-species Reactivities

Bold-faced linked terms within entries usually refer to terms explained within the context of a particular entry. They exist as entries in the alphabetical lists of entries and there is normally no need to follow these links

'Backlinks' lists all other COPE entries that contain the current headword within their text bodies. This can be of great utility and I don't think needs further elaboration

'FREETEXT SEARCH' allows string searches over the contents of all COPE pages. The results page lists all COPE entries containing the query string. The query string (bold face) is shown within the sentence context.

1 COPEAlert lists entries added in the most recent version of COPE
1 COPE version history lists entries added in previous versions of COPE
20 MiniCOPE Dictionaries are specialized topical and fully integrated subdictionaries within COPE

Angiogenesis Dictionary section of this encyclopedia (~ 530 entries)
Apoptosis MiniCOPE Dictionary (~ 1640 entries)
CD antigens MiniCOPE Dictionary (~ 3240 entries)
Cell lines in Cytokine Research (~ 275 entries)
Cell types (~ 1750 entries)
Chemokines (~ 400 entries)
Cytokine Inter-species Reactivities [~ 385 entries]
Cytokine Concentrations in Biological Fluids [~ 560 entries]
Dual identity proteins MiniCOPE Dictionary (~ 110 entries)
Hematology MiniCOPE Dictionary (~ 660 entries)
Hormones (~ 600 entries)
Innate immunity defense peptides MiniCOPE Dictionary (~ 1900 entries)
CytokineTopics (~ 80 entries)
Metalloproteinase MiniCOPE Dictionary (~ 315 entries)
Modulins [~ 130 entries]
Protein domains/sequence motifs MiniCOPE Dictionary (~ 215 entries)
regulatory peptide factors (~ 70 entries)
Virulence Factors MiniCOPE Dictionary (~ 400 entries)
NoName Cytokines
Uncharacterized factors [~ 290 entries]

1 CytokineTopics
a good entry point for browsing and getting acquainted with some topics pertaining to the involvement of cytokines and growth factors in biological processes
2 COPEAdopt and CALL FOR CONTRIBUTIONS
for those who want to contribute to COPE
1 Foreword
Some personal remarks and links to Dedication and Acknowledgements, if you care to know
1 COPE CONSULTANCY
just that, conventional and also something highly unconventional
1 COPE Credentials
1 COPE Site Usage Agreement and Disclaimer and Copyright Notice
1 Privacy statement
1 CataCopia
a brief description of the computer programme developed specifically for the creation and automatic hypertexting of dictionary contents
1 Horst Ibelgaufts
contains information about the author of COPE
1 Contact information
well, just that. Use an informative subject line
1 postcard and stampware
just to put a smile on the face of my children
1 Zzzz ... zzzz ... zzzz


Citing COPE:
Please cite COPE as 'COPE: Horst Ibelgaufts' Cytokines & Cells Online Pathfinder Encyclopaedia' and include its URL, which is www.copewithcytokines.org.

Bookmarking COPE and linking to COPE pages:
Individual COPE pages now have stable accession codes and thus can be bookmarked/linked to in this and future versions.


LAST MODIFIED: November 2009


COPE

The following COPE entries contain this entry term or one of its hypertext synonyms:

A-cells, Acknowledgements, Acronymania, adipocytes, ALANIN UND DIE WUNDERLAMPE, Angiogenesis MiniCOPE Dictionary, Apoptosis, Apoptosis MiniCOPE Dictionary, astrocytes, Bacteriokine, basophils, B-cells, Beta-cells, Caenorhabditis elegans, Cajal-Retzius cells, CALL FOR CONTRIBUTIONS, cardiomyocytes, CataCopia, CD antigens MiniCOPE Dictionary, Cell lines in Cytokine Research, cell types, cementoblasts, Chemokines, chief cells, cholangiocytes, chondrocytes, chromaffin cells, Clara cells, Coliborough upon Tween, colonocytes, Contact information, COPEAdopt, COPEAlert, COPE Bioinformatics Initiative, COPE CONSULTANCY, COPE Reviews, COPE Site Usage Agreement and Disclaimer and Copyright Notice, COPE version 10.3, COPE version 15.8, COPE version 1.5, COPE version 16.9, COPE version 18.0, COPE version 19.4, COPE version 19.8, COPE version 22.6, COPE version 3.5, COPE version 8.7, COPE version history, culture shock, cumulus cells, Cytokine Concentrations in Biological Fluids, Cytokine expression profiles, Cytokine Inter-species Reactivities, Cytokines & Cells Online Pathfinder Encyclopaedia, CytokineTopics, dangerokines, Dedication, dendritic cells, Dual identity proteins MiniCOPE Dictionary, duokines, ECL cells, endometrial cells, endothelial cells, enterochromaffin cells, enterocytes, eosinophils, ependymal cells, erythrocytes, EUA, fibroblasts, Folliculo-stellate cells, G cells, goblet cells, granulosa cells, HELP REQUEST, Hematology MiniCOPE Dictionary, Hematopoiesis, hepatic stellate cells, hepatocellular carcinoma, hepatocytes, Hofbauer cells, hormones, Horst Ibelgaufts, hortus siccus, Innate immunity defense peptides MiniCOPE Dictionary, innate immunity, Joke, jungle of interactions, juxtaglomerular cells, keratinocytes, keratocytes, kindynokines, Kupffer cells, KWN, Langerhans cells, LETE, Leydig cells, Liver sinusoidal endothelial cells, LOVE IN CYTOKINELAND, macrophages, madness, mast cells, megakaryocytes, melanocytes, melanoma cells, melanotropic cells, Merkel cells, mesothelial cells, Metalloproteinase MiniCOPE Dictionary, microglial cells, MiniCOPE Dictionaries, monocytes, multiple myeloma cells, Müller cells, myofibroblasts, neurons, neutrophils, NK-cells, NKT-cells, nokines, nomenclature, NoName Cytokines, nothingness, odontoblasts, oligodendrocytes, osteoblasts, osteoclasts, pancreatic acinar cells, Paneth cells, parietal cells, pericytes, perilokines, pinealocytes, platelets, pneumocytes, podocytes, Privacy statement, Protein domains/sequence motifs MiniCOPE Dictionary, Purkinje cells, Quotations, Reed-Sternberg cells, Retinal pigment epithelium cells, Schwann cells, Sertoli cells, Sezary cells, signalokines, smooth muscle cells, Some personal remarks, synoviocytes, T-cells, tendon cells, Theca cells, thymic epithelial cells, thyrocytes, trabecular meshwork cells, trophoblasts, twinkines, Uncharacterized factors, Viagra, Virulence Factors MiniCOPE Dictionary, Zzzz ... zzzz ... zzzz.

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